Home   |   Search   |   Browse   |   Software   |   Help   

Align your sequence(s)

Glycosyl hydrolase family 20, catalytic domain

class : alpha beta number of structures : 2 average size : 399 average PID : 34 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1qba rasmol 338 - 780 - chitobiase Serratia marcescens 1.85 13.9
1hp5 rasmol 151 A 506 A beta-N-acetylhexosaminidase complexed with intermediate analogue NAG-thiazoline Streptomyces plicatus 2.10 19.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Glyco_hydro_20  
CAZy : GH_20  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1qba   ( 338 )    fpYrGIFLDVARNFHkkdAVlrLLdqMaaykLnkFHFHLSDDEGWRIeIp
1hp5a  ( 151 )    yaWrSAMLDVSRhfFgvdeVkrYIdrVarykYnKLHLHLSDDQGWRIaId
                    bbbbbbb       aaaaaaaaaaaa     bbbbb            

                           60        70        80        90        100 
1qba   ( 388 )    gLpELTeVGGqRçhdlsettÇLlpqygqgpdvyGgfFsrqdYIdIIkyAq
1hp5a  ( 201 )    swprLAtyGGstev------------ggg---pGgyYtkaeYkeIvryAa
                     aaaa                               aaaaaaaaaaaa

                           110       120       130       140       150 
1qba   ( 438 )    arqIeVIPEIDMPAHArAAVVSMearykklhaagkeqeAnefrLvDptdt
1hp5a  ( 236 )    srhLeVVPEIDMPGHTNAALASyaeLnçd-----------------gvap
                  a   bbbbb       aaaaaa                            

                           160       170       180       190       200 
1qba   ( 488 )    SnTtsvqffnrqSYLNPÇldsSqrFVdkVIgeIaqMHkeAgQpIkTWHFG
1hp5a  ( 269 )    plytg--tkvGfSsLÇVdkdvTydFVddVIgeLAaLT-----pgryLHIG
                                     aaaaaaaaaaaaaaaa           bb  

                           210       220       230       240       250 
1qba   ( 538 )    GDeAkNirlgagyTdkakpepgkgiidqgnedkpWakSqvÇqtmikegkv
1hp5a  ( 312 )    GDEA--hsTp----------------------------------------
                                                                    

                           260       270       280       290       300 
1qba   ( 588 )    admehLpSyFGqeVSklVkahgIdRMQAWqdGLkdAesskaFaTsrVGVN
1hp5a  ( 320 )    ---kadfvaFMkrVQpiVakygk-tVVGWHq-LAgAepve-----gALVQ
                       aaaaaaaaaaaaaaa    bbbbb33 3              bbb

                           310       320       330       340       350 
1qba   ( 638 )    FwdtLyw--gGfdsVNdwAnkgYeVVVSNPDYVYMDFpyevnpde-rGyy
1hp5a  ( 360 )    YWGLdrtgdaekaeVAeAArngTGLILSPADrTYLDMkYtk--dTplGls
                  b         aaaaaaaaaa   bbbb                       

                           360       370       380       390       400 
1qba   ( 685 )    wGTrfSderkVfsFAPdNMPqNAetsvdrdgnhfnAkSdkpWpgAyGLSA
1hp5a  ( 408 )    wAg-yVeVqrSYdwdPagyLp-----------------gApadaVrGVEA
                         aaaaa                                  bbbb

                           410       420       430       440       450 
1qba   ( 735 )    QLwSetQrtdpqMeyMIfpRAlsVAeRSwhrag-----------------
1hp5a  ( 440 )    PLWTEtLsdpdqLDyMAFPRLpgVAeLGwspasthdwdtYkvrLAaqApy
                  bb       aaaaaaaa  aaaaaaaaaa                     

                           460     
1qba   ( 768 )    ----weqdyragreykG
1hp5a  ( 490 )    WeaagIdFyrSpqVpWt
                                   


For comments or questions, please send us email. Copyright © 1997-2005 The HOMSTRAD authors