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Align your sequence(s)

Glycosyl hydrolase family 48

class : all alpha number of structures : 2 average size : 635 average PID : 61 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1l1y rasmol 28 A 669 A endoglucanase SS Clostridium thermocellum 2.40 18.9
1fce rasmol 1 - 629 - endoglucanase F Clostridium cellulolyticum 2.0 16.5
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Glyco_hydro_48  
CAZy : GH_48  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1l1ya  (  28 )    gptkAptkdgtsYkdLFleLygkIkdpkngYfSpdegIPYHSietLIVea
1fce   (   1 )    asspAn----kvYqdrFesMyskIkdpangYfSe-qgIPyHSietLMVea
                              aaaaaaaaaaaaa 333                     

                           60        70        80        90        100 
1l1ya  (  78 )    PDYGhVTTSeAFSYYVWLEAMyGnltgnWsgVetAWkvMedwIIPdsteQ
1fce   (  46 )    PDyGhVTTSeAMSYYMWLEAMhGRFsgdFtgFdkSWsVTeqyLIPtekdQ
                        bbaaaaaaaaaaaaaaaaaa   aaaaaaaaaaaaa        

                           110       120       130       140       150 
1l1ya  ( 128 )    p--gMssYnpnsPatYadeyedPsyYpSelkfdtvrvGsDpVhndLvsay
1fce   (  96 )    pntSMsrYdankPATyApefqdpskYpSpLdt-sqpVGrDpInsqLtsay
                                        333  bb             aaaaaaaa

                           160       170       180       190       200 
1l1ya  ( 176 )    g-pnMyLMHwLMDVdNwYgFgt----gtrAtFInTfqRgeqEstWeTIPH
1fce   ( 145 )    gtsmLyGMHwILDVdnwYgFGaradgtskpSyINTfQRgeqEstWeTIPQ
                            bbb                 bbbb               b

                           210       220       230       240       250 
1l1ya  ( 221 )    pSiEefkyGgpnGFldLFtkdr-syakqWrYtNaPDAEGRAIQAVyWAnk
1fce   ( 195 )    pCwDehkfGgqyGFldLftkdtgtpakQFKYTNaPdADARAVQATYwADq
                  b bb          aaaabb       bbbbb  aaaaaaaaaaaaaaaa

                           260       270       280       290       300 
1l1ya  ( 270 )    WAkeqgkGsaVasVVskAakMGDFLRNDMFDkYFMkigaqdktpAtgydS
1fce   ( 245 )    WAkeqgk--sVstSvgkAtkMGDYLRYSFFDKYFRkigqp-sqaGtgydA
                  aaa        aaaaaaaaaaaaa33333                     

                           310       320       330       340       350 
1l1ya  ( 320 )    AHyLMAwyTAWGGGigaswAwKIGCShAHFGyQNPFQGwVSAtqsdFaPk
1fce   ( 292 )    AHyLLSwYYAWGGGidstwSWIIGSShNHFGyQNPFAAwVLStdanFkPk
                           bbbbb     bbbb   bbb333  aaaaaaaaa 333   

                           360       370       380       390       400 
1l1ya  ( 370 )    SsnGkrDWttSykrQLeFYqWLQSaeGGIAGGATNSwnGrYekYpagtst
1fce   ( 342 )    SsnGasDWakSldrQLeFYqWLQSaeGAIAGGATNSwnGrYeavpsgtst
                     aaaaaaaaaaaaaaaaaa          bbb               b

                           410       420       430       440       450 
1l1ya  ( 420 )    FygMAYvphPvyadpgsNqwFGFQAWSMQRVMEYYLEtGdssVknLIkkW
1fce   ( 392 )    FygMGYvenPvyadpGsNtwFGMQVWSMQRVAELYyktgdarAkkLLdkW
                  b  bbbb              aaaaaaaaaaaaaaaaa     aaaaaaa

                           460       470       480       490       500 
1l1ya  ( 470 )    VdwVmseIklyddGtFaIPsdLeWsgqPdtWtg--tytgNpnLhVrVtsy
1fce   ( 442 )    AkwIngeIkfnadgtFqIPstIdWegqPdtwnptqgytgNanLhVkVvny
                  aaaaa   bb     bbbbbbbbbb                  bbbbbbb

                           510       520       530       540       550 
1l1ya  ( 518 )    gtdLGVAGSLANALATYAAATerwegkldtkArdmAaeLVnrAWyNfycs
1fce   ( 492 )    gtdLGCASSLANTLTYYAaksg------detSrqnAqkLLdaMwnnysds
                  b  aaaaaaaaaaaaaaaaaa        aaaaaaaaaaaaaaaaaa   

                           560       570       580       590       600 
1l1ya  ( 568 )    egkGVVTeearadYkrFFeqeVyVpagwsgtMPngdkIqpgIkFIdIRtk
1fce   ( 536 )    --kGIStveqRgdYhrFldqeVfVpagwtgkMpngdvIksgvkFidIRsk
                          bb     aaaa          bb     bb     3333 33

                           610       620       630       640       650 
1l1ya  ( 618 )    YrqdpyydiVyqaylrgeaPvLnYhRFWHEVDLAVAMGvLAtyfpdmtYk
1fce   ( 584 )    YkqdpeWqtMvaalqagqvPtqrLHrFWaQSEFAVANGVYAilfpd    
                  333   aaaaaaaaa     bb    aaaaaaaaaaaaaaaaa       

                    
1l1ya  ( 668 )    vp
1fce                
                    


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