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Align your sequence(s)

glycosyl hydrolase family 14 (beta-amylase)

class : alpha beta barrel number of structures : 3 average size : 469 average PID : 44 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1b1y rasmol 5 A 504 A beta-amylase Hordeum vulgare 2.5 18.7
1byb rasmol 5 - 495 - beta-amylase Glycine max 1.9 14.9
1b9z rasmol 1 A 418 A beta-amylase Bacillus cereus 2.10 17
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Glyco_hydro_14  
CAZy : GH_14  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1b1ya  (   5 )          mkgNYVQVyVmLpldAVsvnnrfekgdeLraqLrKLveAgVDGV
1byb   (   5 )        snmllNYVPVyVMLpLgvVnvdnvFedpdgLkeqLlqLraAgVdGV
1b9za  (   1 )    AvngkgmnpdY-kAYLmAPlkkIpevt---nwetFendLrwAkqNgFyAI
                               bbbb              aaaaaaaaaaaaa    bb

                           60        70        80        90        100 
1b1ya  (  49 )    MVdVWWGLVEgkgpkaydWsAYkqLFeLVqkagLkLqAIMSFHqCggnvg
1byb   (  51 )    MVDVWWGIIElkgpkqydWraYrsLFqlVqeCgLtLQAIMSFHqCggnvg
1b9za  (  47 )    TVdFWWGdMEkngdqqfdfsyAqrFAqSVknAgMkMIPiISTHqÇggnvg
                  bbbbb              aaaaaaaaaaaa   bbbbbbb         

                           110       120       130       140       150 
1b1ya  (  99 )    davnIpIPqwVrdVGtrdpdIFYTDghgtrNiEYLTLgVDnqplFhgRSA
1byb   ( 101 )    DivnIpIPqwVldiGesnhdIFYTNrsgtrnkeYLTVgVDnepiFhgrtA
1b9za  (  97 )    ddçnvpIPswVwnqk-sddSLyFkSetgtvnkeTLNPlAsd-------VI
                                        bb     bb                  a

                           160       170       180       190       200 
1b1ya  ( 149 )    vqMYadYMtsFrenMkdFLdagvIvDIEVGLGPaGeLRYPSyPqshgwsf
1byb   ( 151 )    ieIYSdYMksFrenMsdFLesgLIidIEVGLGPAGELRYPSYPqsqgWef
1b9za  ( 139 )    rkEYgeLYtaFaaaMkpykd--VIakIyLSGgPageLRYPSyttsDgTgy
                  aaaaaaaaaaaaaa            bbb   333        333    

                           210       220       230       240       250 
1b1ya  ( 199 )    pgIGeFICyDkyLqadFkaaAaav-----------gh-----pewefPnd
1byb   ( 201 )    prIGeFQCyDkyLkadFkaaVara-----------gh-----peweLPdd
1b9za  ( 187 )    psrGkFQAyTefAkskFrlwVlnkygslneVnkaWgtkliselaIlPps-
                            aaaaaaaaaaaaa                           

                           260       270       280       290       300 
1b1ya  ( 233 )    agqyndtPerTqFFrdnGtYlsekGrfFLawYsnNLIkHGdrILdeANkv
1byb   ( 235 )    agkyndvPesTgFFksngtYvtekGkfFLtwYsnkLlnHGDqILdeANkA
1b9za  ( 236 )    ------dGe--qFLm--ngylsmyGkDYLeWYQgiLenHTklIGelAhna
                                    333 aaaaaaaaaaaaaaaaaaaaaaaaaaaa

                           310       320       330       340       350 
1b1ya  ( 283 )    Flg-ykVqLAIKIAGVHwWykvp--SHAAELTAGYYNlhdrdGYrTIArM
1byb   ( 285 )    Flg-ckVkLAIKVSGIHWWykve--nHAAELTAGYYNlndrdGYRPIArM
1b9za  ( 276 )    FdttFqvpIGAkIAGVhwqynnptiphGAEkPAGYn------dyshLLdA
                          bbbbb                aaaa           aaaaaa

                           360       370       380       390       400 
1b1ya  ( 330 )    LkrHrAsINFtCAEMrdseqppdAmSAPeeLVqQVLSAGWrEgLnVsCEN
1byb   ( 332 )    LsrHhAILNFTCLEMrdseqpsdAkSGPqeLVqqVLsgGwredIrVaGEN
1b9za  ( 320 )    FksakLdVTFtCLEmtdk-gsypeySmPktLVqnIAtlAnekgIvLNGeN
                  a     bbbb                 aaaaaaaaaaaaaa    bbb  

                           410       420       430       440       450 
1b1ya  ( 380 )    alprydptAYnTILRNARPhGinqsgpPehkLfgFTYlrLsnqLVegqnY
1byb   ( 382 )    AlprydatAYnqIILNAKPqGvnnnGpPklsMfgVTYlrLsddLlqksnf
1b9za  ( 369 )    alsIgneeeYkrVaeMAfn----------ynFaGFTLlrYqdVMynnslM
                        aaaaaaaaaaa                bbbb         aaaa

                           460       470       480       490       500 
1b1ya  ( 430 )    VNFkTFVdrMHAnlprdpyv----dpmapLprSgpeisiemIlqAAqpki
1byb   ( 432 )    niFkkFVlkMHAdqdycanpqkYnhaitplkpsapkipievLleAt-kpt
1b9za  ( 409 )    gkFkdlLGvt                                        
                  aaaaaa                                            

                           510       520       
1b1ya  ( 476 )    qpfpFqehTdlpVgptggmggqaegptcg
1byb   ( 481 )    lpfpWlpeTdmkVd               
1b9za                                          
                                               


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