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Align your sequence(s)

glycosyl hydrolases family 17

class : alpha beta barrel number of structures : 2 average size : 306 average PID : 52 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1aq0 rasmol 1 A 306 A lichenase II Hordeum vulgare 2.0 17
1ghs rasmol 1 A 306 A glucan endo-1,3-beta-glucosidase gII Hordeum vulgare 2.3 17.9
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Glyco_hydro_17  
CAZy : GH_17  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1aq0a  (   1 )    iGVCYgmsAnnlpaastVVsmFksngIksMRLyapnqaALqaVggtgInV
1ghsa  (   1 )    iGVCYgviGnnlpsrsdVvqlYrskgIngMRIyfaDgqALsaLrnsgIgL
                   bbb          aaaaaaaaaaa   bbbb    aaaaaa      bb

                           60        70        80        90        100 
1aq0a  (  51 )    VVgApndvLsnLAaspaaAaswVksnIqay-pkVsFryVCVGneVaggat
1ghsa  (  51 )    ILDIgndqLanIaastsnAaswVqnnVrpyypaVnIkyIAAGneVqggat
                  bbb  333aaaaaa aaaaaaaaaaa        bbbbbbbbb   3333

                           110       120       130       140       150 
1aq0a  ( 100 )    rnLvpAMknVhgaLvaaglghIkVTTSVsqaiLgvfspPsaGsFtgeAaa
1ghsa  ( 101 )    qsIlpAMrnLnaaLsaaglgaIkVSTSIrfdEVansfpPsaGvFk---na
                  33aaaaaaaaaaaaaa      bbbbbbb333bb    333 bb      

                           160       170       180       190       200 
1aq0a  ( 150 )    fMgpVVqFLartnApLMANIyPYlawaynpsamdmgYALFnasgtvvrdg
1ghsa  ( 148 )    yMtdVArlLastgApLLANVyPYfayrdnpgsislnyATfqpgtt-vrDq
                  aaaaaaaaaaaa   bbbb  aaaaaaa      aaaaa       bb  

                           210       220       230       240       250 
1aq0a  ( 200 )    --aygYqnLFDTTVDAFytAMgkhgGssVkLVVSeSGWPSgggtaAtpan
1ghsa  ( 197 )    nngltYtSlFDamVDAVyaALekagApaVkVVVSeSGWPsaggfaAsagn
                      bb  aaaaaaaaaaaaaa        bbbbb            aaa

                           260       270       280       290       300 
1aq0a  ( 248 )    ArFYNqhLinhvgrGTprhpgaieTYIfAMFnEnqkd-sgveqnWGLFyp
1ghsa  ( 247 )    ArtYNqgLinhvggGTpkkrealeTYIfAMFnEnqktgdaTersFGLFnp
                  aaaaaaaaa                bb             333       

                           310 
1aq0a  ( 297 )    nmqhVYpInf
1ghsa  ( 297 )    dkspaynIqf
                            


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