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Align your sequence(s)

glycosyl hydrolases family 18

class : alpha beta barrel number of structures : 5 average size : 279 average PID : 20 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1edt rasmol 6 - 270 - endo-beta-N-acetylglucosaminidase H Streptomyces plicatus 1.9 19.9
2ebn rasmol 5 - 289 - endo-beta-N-acetylglucosaminidase F1 Flavobacterium meningose 2.0 15.8
2hvm rasmol 1 - 273 - hevamine A (chitinase/lysozyme) Hevea brasiliensis 1.80 14.9
1cnv rasmol 1 - 283 - concanavalin B (con b) Canavalia ensiformis 1.65 17.2
1nar rasmol 1 - 289 - narbonin Vicia narbonensis l. 1.8 15.9
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Glyco_hydro_18  
CAZy : GH_18  
other info key to JOY annotation | show related PDB structures

                          10        20        30        40        50  
1edt  (   6 )      kqgptSVAYVeVn--n--nsMlnVgkYtLadgggnAFdVAVIfAAnIn
2ebn  (   5 )    ttkanikLFSFTeVn--d--TNPlNNlNFtLknSgkpLVdMVVLfSAnIn
2hvm  (   1 )         ggIAIYWGqn--gnEgtLtqTÇst-------rkYsyVNIAfLnkF
1cnv  (   1 )     dissTeIAVYWGq---reDglLrdTÇkt-------nnYkIVFISfLdkF
1nar  (   1 )       pkpIFREYIGVkpnsttlhdFpteIInte----tLeFHYILGfAiEs
                       bbbbbb                            bbbbbbbbbb

                          60        70        80        90        100 
1edt  (  50 )    ydtg---tktayLhfnenVq----rvLdnavtqIrpLqqq--gIkVLLSV
2ebn  (  51 )    ydaa---ndkVfVsnnpnVq----hLLtnrakYLkpLqdk--gIkVILSI
2hvm  (  37 )    G-ng---q-tpqInLaghçnpaag-gÇtivSnGIrsÇqiq--gikVMLSL
1cnv  (  40 )    g-çe---irkPeLeLegGpsvgnpÇsfLesQIkqrm--gVkVFLAL
1nar  (  44 )    yyesgkGtGtFeesWdv---------elFGpekVknlkrrhpeVkVVISI
                            bb                 aaa aaaaa     bbbbbb

                          110       120       130       140       150 
1edt  (  91 )    lGnhqGAGFANFpsqqaAsaFAkqLsdaVak----------ygLdGVDFD
2ebn  (  92 )    lGnhdrSGIANL-starAkaFAqeLkntCdl----------ynLdGVFFD
2hvm  (  79 )    GGgigsYtLa---sqadAknVAdyLwnnFLggksssrpLgdavLdGIDFD
1cnv  (  84 )    GGpkgtYsAç---sadYAkdLAeyLhtyFLserr-egpLGkVaLdGIHFD
1nar  (  85 )    GGrgvntpFdPaeenvWvsnAkesLklIIqkYsdds----gnlIdGIDIh
                 b             aaaaaaaaaaaaaaa                bbbbb

                          160       170       180       190       200 
1edt  ( 131 )    DeyAeyg---nngtaqpndsSFVhLVtaLranMp------dkiISLYni-
2ebn  ( 131 )    DeySayqtpppsgFvtpsnnaAArLAyeTkqaMp------nklVTVyVy-
2hvm  ( 126 )    Ieh-g------------stlyWddLAryLsayskq-g--kkVyLTAAPqÇ
1cnv  ( 130 )    IqkPv------------delnWdnLLeeLyqIkdvyq--stFlLSAAPgÇ
1nar  ( 131 )    YehIr------------sdepFAtLMGqLIteLkkdddLnInvVSIAPSe
                                      aaaaaaaaaaa          bbbb    

                          210       220       230       240       250 
1edt  ( 171 )    ----gpAasrls-yggvdVsdkFdyAWNPyyg----twq---------vP
2ebn  ( 174 )    ----srTssFptavdgvnAGsYVdyAIH-dyg----gsy---------dL
2hvm  ( 160 )    pfpdryLgtAL-n------tglFdyVWVqFYnnppçqyssgninnIinsW
1cnv  ( 166 )    lspdeyLdnAI-q------trhFdyIFVrFYndrsÇqYstgniqrIrnaW
1nar  ( 169 )    n-NsshYqkLY-n-a---kkdyInwVDYqFSnqq-kpVs--tddaFveiF
                        a                bbbb                      

                          260       270       280       290       300 
1edt  ( 203 )    g---IaL-pkaqLSPAAVeIgr-----tsrstVadlArrTvde------g
2ebn  ( 206 )    atnYpgL-aksgMVMSSQEFnq-----gry-ataqaLrnIvtk------g
2hvm  ( 203 )    nrWTtsIn--AgkIFLGLPAApeAag-sGyVppdvLisrILpeIkksp-k
1cnv  ( 209 )    lsWTksVyprdkNLFLELPAsqatApggGyIppsaLigqVLpyLpdLqtR
1nar  ( 210 )    ksLekdYhp--hkVLPGfStDplDtkhnkI-trdiFigGCtrLvqt--fs
                              bbbbbb             aaaaaaa aa        

                          310       320       330       340       
1edt  ( 238 )    ygVYLTynLdgg--------drtadVSaFTreLYgSeAvrt        
2ebn  ( 243 )    YgGHMIfAMdPnrsnft--sgQlpaLklIAkeLYgdeLvysntpyskdw
2hvm  ( 249 )    ygGVMLwsKfyDdkn--------gYSssIldsv                
1cnv  ( 259 )    YaGIALwnrqADket--------gYStnIiryl                
1nar  ( 255 )    LpGVFFWNANdSvipkrdgdkpFiVEltLqqlLaa              
                   bbbbb                 aaaaaaaa                 


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