>P1;hs1lr0a structureX:1lr0: 3 :A: 128 :A:tola protein:Pseudomonas aeruginosa:1.91:18.3 ALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSARNGSVEVLIELPDGTITNASVS RSSGDKPFDSSAVAAVRNVGRIPEQQLPRATFDSLYRQRRIIFKPEDLSLHHHHH*
Paste the following sequence in the input sequence textbox, type in your e-mai address and simply click the 'Search!' button.
WRRPPSARNGSVEVLIELPDGTITNASVS RSSGDKPFDSSAVAAVRNVGRIPEQQLPRATFDSLYRQRRIIFKPEDLSLYou can also check the last option box at the bottom of the page, saying
Search also against a representative set of PDB chains (slower and experimental - known as FUGUE3 (or FUGUE2.1) in CAFASP3)
The 'View Ranking' section lists top hits. The significance of Z-scores is explained at the top of the page:
Recommended cutoff : ZSCORE >= 6.0 (CERTAIN 99% confidence) Other cutoff : ZSCORE >= 4.0 (LIKELY 95% confidence) Other cutoff : ZSCORE >= 3.5 (MARGINAL 90% confidence) Other cutoff : ZSCORE >= 2.0 (GUESS 50% confidence) Other cutoff : ZSCORE < 2.0 (UNCERTAIN)The 'View Alignments' section provides sequence-structure alignments in various formats.
Click here for more detailed information on the output page.