National Institutes of Biomedical Innovation, Health and Nutrition
Institute for Protein Research

Members (NIBIOHN, ArCHER)

Name Telephone
Kenji Mizuguchi +81 6 6384 1572  kenji
Yayoi Natsume +81 6 6384 1574 natsume
Mari Itoh +81 6 6384 1587 mari
Suyong Re +81 6 6384 1587 suyongre
Yi-An Chen +81 6 6384 1587 chenyian
Attayeb Mohsen +81 6 6384 1587 attayeb
Hitoshi Kawashima +81 6 6384 1587 hkawashi
Rodolfo Sebastian Allendes Osorio +81 6 6384 1587 rallendes
Chihiro Higuchi +81 6 6384 1587 higuchi
Akiko Fukagawa +81 6 6384 1587 a-fukagawa
Masataka Kuroda +81 6 6384 1587 m-kuroda
Hisafumi Chikamori   chikamori
Kyohei Koyama u117209j  (+) @ (+) ecs.osaka-u.ac.jp
Martin martin  (+) @ (+) phs.osaka-u.ac.jp
Kaoru Takadera u852998k  (+) @ (+)  ecs.osaka-u.ac.jp
Ryoya Ondo u773040g   (+) @ (+)   ecs.osaka-u.ac.jp
Aki Takigawa +81 6 6384 1587 a-takigawa
Mitsuyo Tojo +81 6 6384 1587 m.tojo
Mihoko Iwagaki +81 6 6384 1587 mihoko
Kenji Mizuguchi

Director Artificial Intelligence Center for Health and Biomedical Research (ArCHER)

Research Group Head Laboratory of In-silico Design

  • Guest Professor, Graduate School of Frontier BioSchiences, Osaka University
  • Guest Professor, Graduate School of Pharmaceutical Sciences, Osaka University

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Yayoi Natsume
Yayoi Natsume

 

Duputy Artificial Intelligence Center for Health and Biomedical Research (ArCHER)

Research Group Head Laboratory of Bioinformatics

  • Specially Appointed Professor, Institute of Advanced Medical Sciences Tokushima University

(Research Interests)

  1. Understanding molecular networks by integration of omics-data
  2. Development of methodology to understand molecular actions (e.g. epigenetic regulation) as a system
Mari Itoh
Mari Ito

Research scientist

(Research Interests)

  1. The Exploratory research of biomarkers in immune-disorders, especially exosomes
  2. The stress response in the cells, especially in aging process
  3. Systems biology, network biology, integration of –omics data for whole body systems
Suyong Re
resuyong.jpg

Senior Researcher Laboratory of In-silico Design

(Research Interests)

  1. Structural dynamics and function relationship of biomolecules
  2. Integrated molecular simulation and informatics approaches for drug discovery
Yi-An Chen
Yi-An Chen

Postdoctoral fellow

(Research Interests)

  1. Biological data integration, databases
  2. Data processing
  3. Data visualization
  4. Pipeline analysis
  5. System biology
Attayeb Mohsen
Attayeb Mohsen

Postdoctoral fellow

(Research Interests)

  • Previous research: Neuropharmacology of histamine in anxiety and sleep deprivation.
  • Future plans: Understanding the concepts of Bioinformatics and using the available bioinformatics resources in combination with medical background to contribute in the field of interdisciplinary research.
  • Hobbies: Reading
  • Favorite proverb: To learn something, you need to try it, and you have to sacrifice for it
Hitoshi Kawashima
Hitoshi Kawashima

Postdoctoral fellow

(Research Interests)

  • I worked at a pharmaceutical company for 30 years and joined to this team.
  • My research interest: To identify the disease responsible genes from many candidate genes for common disease derived from genome sequencing. I want to find out drug targets by analyzing the network of the disease responsible genes.
  • My hobby: Go (Igo)
Rodolfo Sebastian Allendes Osorio
Rodolfo Allendes

Postdoctoral fellow

(Research Interests)

  • I am interested in the development of novel visualization methods and tools, and their use within a biological context. Also, I am focused on learn more about machine and deep learning.
Chihiro Higuchi
Chihiro Higuchi

Research assistant

Akiko Fukagawa
Akiko Fukagawa

Research assistant

Masataka Kuroda
Masataka Kuroda

Research coordinator

Affiliation: Mitsubishi Tanabe Pharma.

(Research Interests)

  1. Management of project
  2. Chemiformatics
Hisafumi Chikamori
Hisafumi Chikamori

Postdoctoral fellow

  • Previous research: Neuropathology (glioblastoma), neuronal cell biology (expression of Peg10 in CNS).
  • Future plans: What is bioinformatics? I have been grasping it ambiguously. But I heard there are many “-informatics”-including journal name. So currently I am interested in “neuroinformatics” and so on, which was my major. And I want to widen my perspectives through these journals.
  • Hobbies: Language
  • Favorite adage: See the Good In Others.
Kyohei Koyama
Kyohei Koyama

Graduate school

(Research Interests)

  • I am interested in machine learning applications to protein structures, molecules, and interactions between them.
Martin

Graduate school

(Research Interests)

  • Machine learning, Meta-analysis, Pharmacoinformatics, Health economics
Kaoru Takadera
anonymous

Graduate school

(Research Interests)

  • Bioinformatics, admet prediction
Ryoya Ondo
anonymous

Graduate school

(Research Interests)

  • Bioinformatics, Prediction of protein thermal denaturation
Aki Takigawa
Aki Takigawa

Administrative Assistant

Mitsuyo Tojo
Nao Yonemitsu

Administrative Assistant

  • My motto is "Eat well, Sleep well, Live well."
Mihoko Iwagaki
iwagakimihoko.JPG

Administrative Assistant

  • ”Today is the first day of the rest of your life."
Shandar Ahmad

Visiting Scientist

Affiliation: Jawaharlal Nehru University

(Research Interests)

  • I am interested in developing statistical, machine learning and physics based algorithms to predict biomolecular interactions from sequence.
  • This includes protein-DNA, protein-RNA, protein-protein and other ligand interactions. My current interest is in genome-wide interactions and integrated approaches.
  • I am also interested in deciphereing regulatory dynamics of immune system at a molecular level and trying to discover and decipher unknown regulatory events in macrophages.
Mizuki Morita
Mizuki Morita

Visiting Scientist

Affiliation: Okayama University

(Research Interests)

  1. Molecular recognition by proteins
  2. Understanding, prediction and design of protein structures and functions
  3. Structure, dynamics and function of membrane proteins
  4. Rare diseases and orphan drugs
Jiye Shi
Shi Jiye

Visiting Scientist

Affiliation: UCB Pharma

Contact: Jiye.Shi(@)ucb.com

Luiz Miguel Quinn Camargo
Luiz Miguel Quinn Camargo

Visiting Scientist

Affiliation: UCB Pharma

Contact: luizmiguelc(@)googlemail.com

Yosui Nojima
Yosui Nojima

Visiting Scientist

Affiliation: Osaka University

 

Chioko Nagao
Chioko Nagao

Visiting Scientist

Affiliation: Osaka University

 

Lokesh P. Tripathi
Lokesh P. Tripathi

Visiting Scientist

Affiliation: Institute of Physical and Chemical Research

(Research Interests)

  1. Network-based functional annotation for target discovery.
  2. Biological data integration for enhanced function annotation of genes and genomes.
  3. Evolution of protein repertoire and function.
Reiko Watanabe
Reiko Watanabe

Visiting Scientist

Affiliation: Osaka University

(Research Interests)

Development of a pharmacokinetic prediction models that can be practically applied in drug discovery.

Jonguk Park
Jonguk Park

Visiting Scientist

Affiliation: Meiji Co., Ltd.

(Research Interests)

  • My current research topic is understanding interaction between gut microbial flora and various data from human. And I'm also learning basic of bioinformatics.
Takeshi Fujiwara
Takeshi Fujiwara

Visiting Scientist

(Research Interests)

  • Big data analysis for Chemical and Biological Information
  • Drug Target Discovery