Members (NIBIOHN, ArCHER)
| Name | Telephone | Email (+@nibiohn.go.jp) |
|---|---|---|
| Kenji Mizuguchi | +81 6 6384 1572 | kenji |
| Yayoi Natsume | +81 6 6384 1574 | natsume |
| Mari Itoh | +81 6 6384 1587 | mari |
| Suyong Re | +81 6 6384 1587 | suyongre |
| Yi-An Chen | +81 6 6384 1587 | chenyian |
| Attayeb Mohsen | +81 6 6384 1587 | attayeb |
| Hitoshi Kawashima | +81 6 6384 1587 | hkawashi |
| Rodolfo Sebastian Allendes Osorio | +81 6 6384 1587 | rallendes |
| Chihiro Higuchi | +81 6 6384 1587 | higuchi |
| Akiko Fukagawa | +81 6 6384 1587 | a-fukagawa |
| Masataka Kuroda | +81 6 6384 1587 | m-kuroda |
| Hisafumi Chikamori | chikamori | |
| Kyohei Koyama | u117209j (+) @ (+) | ecs.osaka-u.ac.jp |
| Martin | martin (+) @ (+) | phs.osaka-u.ac.jp |
| Kaoru Takadera | u852998k (+) @ (+) | ecs.osaka-u.ac.jp |
| Ryoya Ondo | u773040g (+) @ (+) | ecs.osaka-u.ac.jp |
| Aki Takigawa | +81 6 6384 1587 | a-takigawa |
| Mitsuyo Tojo | +81 6 6384 1587 | m.tojo |
| Mihoko Iwagaki | +81 6 6384 1587 | mihoko |
Director Artificial Intelligence Center for Health and Biomedical Research (ArCHER)
Research Group Head Laboratory of In-silico Design
- Guest Professor, Graduate School of Frontier BioSchiences, Osaka University
- Guest Professor, Graduate School of Pharmaceutical Sciences, Osaka University
Yayoi Natsume
Duputy Artificial Intelligence Center for Health and Biomedical Research (ArCHER)
Research Group Head Laboratory of Bioinformatics
- Specially Appointed Professor, Institute of Advanced Medical Sciences Tokushima University
(Research Interests)
- Understanding molecular networks by integration of omics-data
- Development of methodology to understand molecular actions (e.g. epigenetic regulation) as a system
Mari Itoh
Research scientist
(Research Interests)
- The Exploratory research of biomarkers in immune-disorders, especially exosomes
- The stress response in the cells, especially in aging process
- Systems biology, network biology, integration of –omics data for whole body systems
Suyong Re
Senior Researcher Laboratory of In-silico Design
(Research Interests)
- Structural dynamics and function relationship of biomolecules
- Integrated molecular simulation and informatics approaches for drug discovery
Yi-An Chen
Postdoctoral fellow
(Research Interests)
- Biological data integration, databases
- Data processing
- Data visualization
- Pipeline analysis
- System biology
Attayeb Mohsen
Postdoctoral fellow
(Research Interests)
- Previous research: Neuropharmacology of histamine in anxiety and sleep deprivation.
- Future plans: Understanding the concepts of Bioinformatics and using the available bioinformatics resources in combination with medical background to contribute in the field of interdisciplinary research.
- Hobbies: Reading
- Favorite proverb: To learn something, you need to try it, and you have to sacrifice for it
Hitoshi Kawashima
Postdoctoral fellow
(Research Interests)
- I worked at a pharmaceutical company for 30 years and joined to this team.
- My research interest: To identify the disease responsible genes from many candidate genes for common disease derived from genome sequencing. I want to find out drug targets by analyzing the network of the disease responsible genes.
- My hobby: Go (Igo)
Rodolfo Sebastian Allendes Osorio
Postdoctoral fellow
(Research Interests)
- I am interested in the development of novel visualization methods and tools, and their use within a biological context. Also, I am focused on learn more about machine and deep learning.
Chihiro Higuchi
Research assistant
Akiko Fukagawa
Research assistant
Masataka Kuroda
Research coordinator
Affiliation: Mitsubishi Tanabe Pharma.
(Research Interests)
- Management of project
- Chemiformatics
Hisafumi Chikamori
Postdoctoral fellow
- Previous research: Neuropathology (glioblastoma), neuronal cell biology (expression of Peg10 in CNS).
- Future plans: What is bioinformatics? I have been grasping it ambiguously. But I heard there are many “-informatics”-including journal name. So currently I am interested in “neuroinformatics” and so on, which was my major. And I want to widen my perspectives through these journals.
- Hobbies: Language
- Favorite adage: See the Good In Others.
Kyohei Koyama
Graduate school
(Research Interests)
- I am interested in machine learning applications to protein structures, molecules, and interactions between them.
Martin
Graduate school
(Research Interests)
- Machine learning, Meta-analysis, Pharmacoinformatics, Health economics
Kaoru Takadera
Graduate school
(Research Interests)
- Bioinformatics, admet prediction
Ryoya Ondo
Graduate school
(Research Interests)
- Bioinformatics, Prediction of protein thermal denaturation
Aki Takigawa
Administrative Assistant
Mitsuyo Tojo
Administrative Assistant
- My motto is "Eat well, Sleep well, Live well."
Mihoko Iwagaki
Administrative Assistant
- ”Today is the first day of the rest of your life."
Visiting Scientist
Affiliation: Jawaharlal Nehru University
(Research Interests)
- I am interested in developing statistical, machine learning and physics based algorithms to predict biomolecular interactions from sequence.
- This includes protein-DNA, protein-RNA, protein-protein and other ligand interactions. My current interest is in genome-wide interactions and integrated approaches.
- I am also interested in deciphereing regulatory dynamics of immune system at a molecular level and trying to discover and decipher unknown regulatory events in macrophages.
Mizuki Morita
Visiting Scientist
Affiliation: Okayama University
(Research Interests)
- Molecular recognition by proteins
- Understanding, prediction and design of protein structures and functions
- Structure, dynamics and function of membrane proteins
- Rare diseases and orphan drugs
Jiye Shi
Visiting Scientist
Affiliation: UCB Pharma
Contact: Jiye.Shi(@)ucb.com
Luiz Miguel Quinn Camargo
Visiting Scientist
Affiliation: UCB Pharma
Contact: luizmiguelc(@)googlemail.com
Yosui Nojima
Visiting Scientist
Affiliation: Osaka University
Chioko Nagao
Visiting Scientist
Affiliation: Osaka University
Lokesh P. Tripathi
Visiting Scientist
Affiliation: Institute of Physical and Chemical Research
(Research Interests)
- Network-based functional annotation for target discovery.
- Biological data integration for enhanced function annotation of genes and genomes.
- Evolution of protein repertoire and function.
Reiko Watanabe
Visiting Scientist
Affiliation: Osaka University
(Research Interests)
Development of a pharmacokinetic prediction models that can be practically applied in drug discovery.
Jonguk Park
Visiting Scientist
Affiliation: Meiji Co., Ltd.
(Research Interests)
- My current research topic is understanding interaction between gut microbial flora and various data from human. And I'm also learning basic of bioinformatics.
Takeshi Fujiwara
Visiting Scientist
(Research Interests)
- Big data analysis for Chemical and Biological Information
- Drug Target Discovery